Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | CPT03_RS14060 | Not Available | Negative | 3398109 - 3398975 | 32426.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | CPT03_RS14065 | Not Available | Negative | 3399013 - 3400386 | 49924.9 |
| porphobilinogen synthase | CPT03_RS14070 | Not Available | Negative | 3400388 - 3401356 | 35689.0 |
| hydroxymethylbilane synthase | CPT03_RS14075 | Not Available | Negative | 3401435 - 3403015 | 58950.6 |
| glutamyl-trna reductase | CPT03_RS14080 | Not Available | Negative | 3403040 - 3404266 | 46585.7 |
| alpha/beta hydrolase family protein | CPT03_RS14085 | Not Available | Positive | 3404427 - 3405257 | 31395.0 |
| duf2911 domain-containing protein | CPT03_RS14090 | Not Available | Negative | 3405327 - 3405842 | 18435.2 |
| hypothetical protein | CPT03_RS14095 | Not Available | Negative | 3406016 - 3406927 | 33140.7 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS14100 | Not Available | Negative | 3406956 - 3408548 | 58935.7 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS14105 | Not Available | Negative | 3408567 - 3411668 | 112969.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

