Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS14010 | Not Available | Negative | 3388674 - 3388943 | 9287.05 |
| response regulator | CPT03_RS14015 | Not Available | Negative | 3389167 - 3392004 | 105791.0 |
| abc transporter atp-binding protein | CPT03_RS14020 | Not Available | Negative | 3392016 - 3393014 | 37383.2 |
| outer membrane beta-barrel protein | CPT03_RS14025 | Not Available | Negative | 3393109 - 3393918 | 30286.1 |
| hypothetical protein | CPT03_RS14030 | Not Available | Negative | 3393950 - 3394669 | 26862.4 |
| rna polymerase sigma factor | CPT03_RS14035 | Not Available | Negative | 3394650 - 3395216 | 21460.1 |
| protoporphyrinogen oxidase hemj | CPT03_RS14040 | Not Available | Negative | 3395292 - 3395840 | 21339.0 |
| uroporphyrinogen decarboxylase | CPT03_RS14045 | Not Available | Negative | 3395848 - 3396870 | 38065.4 |
| hypothetical protein | CPT03_RS14050 | Not Available | Negative | 3396887 - 3397402 | 19623.8 |
| response regulator transcription factor | CPT03_RS14055 | Not Available | Negative | 3397402 - 3398106 | 27368.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

