Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine ammonia-lyase ilva | CPT03_RS13955 | Not Available | Positive | 3377740 - 3378987 | 45746.5 |
| hypothetical protein | CPT03_RS13960 | Not Available | Positive | 3379104 - 3379520 | 15609.7 |
| glycosyltransferase family 39 protein | CPT03_RS13970 | Not Available | Positive | 3379956 - 3381299 | 52547.5 |
| hypothetical protein | CPT03_RS13975 | Not Available | Positive | 3381458 - 3381823 | 13673.8 |
| 6-bladed beta-propeller | CPT03_RS13980 | Not Available | Positive | 3381891 - 3383057 | 45683.7 |
| duf917 family protein | CPT03_RS13985 | Not Available | Negative | 3383061 - 3384209 | 40828.3 |
| hypothetical protein | CPT03_RS13990 | Not Available | Positive | 3384309 - 3384968 | 24832.7 |
| hypothetical protein | CPT03_RS13995 | Not Available | Negative | 3385068 - 3387272 | 80812.3 |
| hypothetical protein | CPT03_RS14000 | Not Available | Negative | 3387296 - 3388258 | 36125.6 |
| hypothetical protein | CPT03_RS14005 | Not Available | Negative | 3388276 - 3388632 | 12662.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

