Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biosynthetic-type acetolactate synthase large subunit | CPT03_RS13905 | Not Available | Positive | 3365675 - 3367414 | 63287.0 |
| acetolactate synthase small subunit | CPT03_RS13910 | Not Available | Positive | 3367424 - 3368041 | 24090.7 |
| dinb family protein | CPT03_RS13915 | Not Available | Positive | 3368071 - 3368538 | 17704.1 |
| ketol-acid reductoisomerase | CPT03_RS13920 | Not Available | Positive | 3368574 - 3370055 | 54088.2 |
| atp-binding cassette domain-containing protein | CPT03_RS13925 | Not Available | Positive | 3370063 - 3371544 | 55700.6 |
| 2-isopropylmalate synthase | CPT03_RS13930 | Not Available | Positive | 3371549 - 3372712 | 42629.9 |
| 3-isopropylmalate dehydratase large subunit | CPT03_RS13935 | Not Available | Positive | 3372754 - 3374169 | 50603.5 |
| 3-isopropylmalate dehydratase small subunit | CPT03_RS13940 | Not Available | Positive | 3374191 - 3374787 | 22350.5 |
| alpha-isopropylmalate synthase regulatory domain-containing protein | CPT03_RS13945 | Not Available | Positive | 3374848 - 3376365 | 56036.9 |
| 3-isopropylmalate dehydrogenase | CPT03_RS13950 | Not Available | Positive | 3376498 - 3377556 | 38457.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

