Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3276 family protein | CPT03_RS01365 | Not Available | Negative | 362013 - 362342 | 13002.0 |
| abc transporter atp-binding protein | CPT03_RS01370 | Not Available | Negative | 362412 - 364202 | 68063.3 |
| glu/leu/phe/val family dehydrogenase | CPT03_RS01375 | Not Available | Positive | 364314 - 365402 | 39072.2 |
| transcription antitermination factor nusb | CPT03_RS01380 | Not Available | Positive | 365436 - 366386 | 36820.5 |
| duf1573 domain-containing protein | CPT03_RS01385 | Not Available | Positive | 366393 - 366863 | 16677.1 |
| preprotein translocase subunit yajc | CPT03_RS01390 | Not Available | Positive | 366884 - 367216 | 11918.0 |
| hypothetical protein | CPT03_RS01395 | Not Available | Positive | 367300 - 368247 | 36823.1 |
| dephospho-coa kinase | CPT03_RS01400 | Not Available | Positive | 368247 - 368843 | 22087.9 |
| exonuclease | CPT03_RS01405 | Not Available | Positive | 368843 - 369784 | 36022.8 |
| duf5522 domain-containing protein | CPT03_RS22870 | Not Available | Positive | 369784 - 369942 | 6125.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

