Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkd domain-containing protein | CPT03_RS13795 | Not Available | Negative | 3344182 - 3345138 | 34845.4 |
| hypothetical protein | CPT03_RS13800 | Not Available | Positive | 3345374 - 3346657 | 47303.9 |
| gyri-like domain-containing protein | CPT03_RS13805 | Not Available | Positive | 3346810 - 3347265 | 17376.4 |
| carboxypeptidase-like regulatory domain-containing protein | CPT03_RS13810 | Not Available | Positive | 3347696 - 3348418 | 25845.8 |
| hypothetical protein | CPT03_RS13815 | Not Available | Positive | 3348554 - 3349102 | 21357.7 |
| gnat family n-acetyltransferase | CPT03_RS13820 | Not Available | Positive | 3349172 - 3349651 | 18551.5 |
| hypothetical protein | CPT03_RS23135 | Not Available | Negative | 3349899 - 3350375 | 18863.0 |
| hypothetical protein | CPT03_RS13830 | Not Available | Positive | 3350657 - 3350971 | 11642.1 |
| recombinase family protein | CPT03_RS23295 | Not Available | Positive | 3350952 - 3352658 | 66345.1 |
| hypothetical protein | CPT03_RS23145 | Not Available | Negative | 3352759 - 3353826 | 40680.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

