Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh92 family glycosyl hydrolase | CPT03_RS13590 | Not Available | Negative | 3290488 - 3293673 | 119564.0 |
| endonuclease/exonuclease/phosphatase family protein | CPT03_RS13595 | Not Available | Negative | 3293670 - 3294536 | 32939.4 |
| hypothetical protein | CPT03_RS13600 | Not Available | Negative | 3295594 - 3296529 | 34126.4 |
| phage tail protein | CPT03_RS13605 | Not Available | Positive | 3296675 - 3297205 | 18753.1 |
| phage tail protein | CPT03_RS13610 | Not Available | Positive | 3297217 - 3297747 | 18091.5 |
| phage tail protein | CPT03_RS13615 | Not Available | Positive | 3297771 - 3298322 | 19289.8 |
| abc transporter substrate-binding protein | CPT03_RS13620 | Not Available | Positive | 3298347 - 3299501 | 43360.7 |
| ydg domain-containing protein | CPT03_RS13625 | Not Available | Positive | 3299537 - 3310132 | 359755.0 |
| porp/sprf family type ix secretion system membrane protein | CPT03_RS13630 | Not Available | Positive | 3310170 - 3311063 | 32741.2 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | CPT03_RS13635 | Not Available | Positive | 3311079 - 3311771 | 26486.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

