Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS13545 | Not Available | Positive | 3280371 - 3280691 | 12314.2 |
| prephenate dehydrogenase | CPT03_RS13550 | Not Available | Negative | 3280745 - 3281593 | 30940.1 |
| pyridoxal phosphate-dependent aminotransferase | CPT03_RS13555 | Not Available | Negative | 3281627 - 3282784 | 43514.5 |
| family 16 glycosylhydrolase | CPT03_RS13560 | Not Available | Negative | 3282973 - 3283857 | 34099.4 |
| heat repeat domain-containing protein | CPT03_RS13565 | Not Available | Negative | 3283861 - 3284619 | 29637.6 |
| hypothetical protein | CPT03_RS22815 | Not Available | Negative | 3284671 - 3284829 | 5980.14 |
| plastocyanin/azurin family copper-binding protein | CPT03_RS13570 | Not Available | Negative | 3284904 - 3286925 | 74486.4 |
| hypothetical protein | CPT03_RS13575 | Not Available | Negative | 3286934 - 3287539 | 22093.5 |
| endo-1,4-beta-xylanase | CPT03_RS13580 | Not Available | Positive | 3287914 - 3289011 | 42652.3 |
| alpha/beta hydrolase | CPT03_RS13585 | Not Available | Positive | 3289036 - 3289878 | 31685.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

