Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trag family conjugative transposon atpase | CPT03_RS13495 | Not Available | Positive | 3271395 - 3273842 | 92468.2 |
| conjugal transfer protein trai | CPT03_RS13500 | Not Available | Positive | 3273847 - 3274518 | 25589.1 |
| hypothetical protein | CPT03_RS13505 | Not Available | Positive | 3274515 - 3274958 | 16868.7 |
| hypothetical protein | CPT03_RS13510 | Not Available | Positive | 3274963 - 3275613 | 25160.5 |
| hypothetical protein | CPT03_RS13515 | Not Available | Positive | 3275610 - 3276236 | 24097.5 |
| conjugative transposon protein traj | CPT03_RS13520 | Not Available | Positive | 3276248 - 3277435 | 42714.2 |
| conjugative transposon protein trak | CPT03_RS13525 | Not Available | Positive | 3277450 - 3278079 | 24334.9 |
| hypothetical protein | CPT03_RS13530 | Not Available | Positive | 3278069 - 3278404 | 12555.6 |
| conjugative transposon protein tram | CPT03_RS13535 | Not Available | Positive | 3278401 - 3279495 | 40166.3 |
| hypothetical protein | CPT03_RS13540 | Not Available | Positive | 3279516 - 3280307 | 30572.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

