Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | CPT03_RS13400 | Not Available | Negative | 3246066 - 3246956 | 34682.1 |
| gnat family n-acetyltransferase | CPT03_RS13405 | Not Available | Negative | 3247096 - 3247665 | 21985.1 |
| hypothetical protein | CPT03_RS22810 | Not Available | Negative | 3247717 - 3247890 | 6665.84 |
| sensor histidine kinase | CPT03_RS13410 | Not Available | Positive | 3247998 - 3249068 | 41075.9 |
| lytr/algr family response regulator transcription factor | CPT03_RS13415 | Not Available | Positive | 3249065 - 3249790 | 26990.0 |
| lantibiotic dehydratase | CPT03_RS13420 | Not Available | Negative | 3249801 - 3252662 | 110476.0 |
| hypothetical protein | CPT03_RS23130 | Not Available | Positive | 3253513 - 3253773 | 9917.56 |
| hypothetical protein | CPT03_RS13430 | Not Available | Positive | 3254496 - 3255971 | 56479.1 |
| hypothetical protein | CPT03_RS13435 | Not Available | Positive | 3255989 - 3258073 | 78357.6 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS13440 | Not Available | Positive | 3258286 - 3261450 | 117247.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

