Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | CPT03_RS13350 | Not Available | Negative | 3233976 - 3235127 | 43510.4 |
| rna polymerase sigma-70 factor | CPT03_RS13355 | Not Available | Negative | 3235212 - 3235769 | 21725.3 |
| duf4822 domain-containing protein | CPT03_RS13360 | Not Available | Negative | 3236456 - 3236941 | 18042.5 |
| helix-turn-helix transcriptional regulator | CPT03_RS13365 | Not Available | Negative | 3237490 - 3237828 | 13142.4 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS13370 | Not Available | Positive | 3238366 - 3241515 | 117048.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS13375 | Not Available | Positive | 3241527 - 3242906 | 52278.0 |
| tlpa family protein disulfide reductase | CPT03_RS13380 | Not Available | Positive | 3242933 - 3244471 | 58415.3 |
| hypothetical protein | CPT03_RS13385 | Not Available | Negative | 3244527 - 3244829 | 10747.5 |
| maue/doxx family redox-associated membrane protein | CPT03_RS13390 | Not Available | Negative | 3244913 - 3245371 | 16637.2 |
| hypothetical protein | CPT03_RS13395 | Not Available | Negative | 3245474 - 3246085 | 24253.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

