Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS13300 | Not Available | Positive | 3220233 - 3220421 | 6566.81 |
| tfox/sxy family protein | CPT03_RS13305 | Not Available | Negative | 3220508 - 3220789 | 10733.0 |
| conjugal transfer protein mobc | CPT03_RS13310 | Not Available | Negative | 3221068 - 3223059 | 74818.2 |
| relaxase/mobilization nuclease domain-containing protein | CPT03_RS13315 | Not Available | Negative | 3223069 - 3224310 | 45917.6 |
| plasmid mobilization protein | CPT03_RS13320 | Not Available | Negative | 3224295 - 3224687 | 15129.5 |
| hypothetical protein | CPT03_RS13325 | Not Available | Positive | 3225155 - 3225781 | 24251.4 |
| rtec domain-containing protein | CPT03_RS13330 | Not Available | Negative | 3225947 - 3226834 | 33472.8 |
| fibronectin type iii domain-containing protein | CPT03_RS13335 | Not Available | Negative | 3227187 - 3228821 | 61501.4 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS13340 | Not Available | Negative | 3228787 - 3230307 | 56085.7 |
| tonb-dependent receptor | CPT03_RS13345 | Not Available | Negative | 3230324 - 3233716 | 123756.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

