Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | CPT03_RS13205 | Not Available | Positive | 3194984 - 3195859 | 33889.1 |
| hypothetical protein | CPT03_RS13210 | Not Available | Positive | 3196145 - 3196351 | 7078.68 |
| hlyd family secretion protein | CPT03_RS13215 | Not Available | Positive | 3196391 - 3197587 | 45184.5 |
| peptidase domain-containing abc transporter | CPT03_RS13220 | Not Available | Positive | 3197595 - 3199760 | 80571.8 |
| tcr/tet family mfs transporter | CPT03_RS13225 | Not Available | Positive | 3199826 - 3201058 | 44437.6 |
| gtpase obge | CPT03_RS13230 | Not Available | Negative | 3201055 - 3202053 | 35942.4 |
| adenylate kinase | CPT03_RS13235 | Not Available | Negative | 3202156 - 3202725 | 21006.1 |
| right-handed parallel beta-helix repeat-containing protein | CPT03_RS13240 | Not Available | Negative | 3203064 - 3204635 | 56822.0 |
| ipt/tig domain-containing protein | CPT03_RS13245 | Not Available | Negative | 3204710 - 3206017 | 45340.3 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS13250 | Not Available | Negative | 3206051 - 3207922 | 71066.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

