Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialidase family protein | CPT03_RS13155 | Not Available | Negative | 3183541 - 3184803 | 46149.1 |
| fadr/gntr family transcriptional regulator | CPT03_RS13160 | Not Available | Negative | 3184960 - 3185646 | 26078.4 |
| hypothetical protein | CPT03_RS13165 | Not Available | Negative | 3185731 - 3186573 | 30478.1 |
| rna polymerase sigma factor | CPT03_RS13170 | Not Available | Positive | 3186756 - 3187364 | 23066.3 |
| hypothetical protein | CPT03_RS13175 | Not Available | Positive | 3187351 - 3188553 | 43977.0 |
| duf1801 domain-containing protein | CPT03_RS13180 | Not Available | Positive | 3188888 - 3189304 | 15624.0 |
| c-type cytochrome | CPT03_RS13185 | Not Available | Negative | 3189362 - 3189739 | 13119.1 |
| gfo/idh/moca family protein | CPT03_RS13190 | Not Available | Negative | 3189799 - 3190914 | 41569.4 |
| sugar phosphate isomerase/epimerase family protein | CPT03_RS13195 | Not Available | Negative | 3190950 - 3191807 | 32038.1 |
| pvc-type heme-binding cxxch protein | CPT03_RS13200 | Not Available | Negative | 3191836 - 3194862 | 111738.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

