Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsz | CPT03_RS13010 | Not Available | Negative | 3148021 - 3149655 | 59711.8 |
| cell division protein ftsa | CPT03_RS13015 | Not Available | Negative | 3149785 - 3151143 | 49461.1 |
| cell division protein ftsq/divib | CPT03_RS13020 | Not Available | Negative | 3151194 - 3152069 | 33109.4 |
| udp-n-acetylmuramate--l-alanine ligase | CPT03_RS13025 | Not Available | Negative | 3152062 - 3153417 | 49980.0 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CPT03_RS13030 | Not Available | Negative | 3153417 - 3154532 | 40249.6 |
| ftsw/roda/spove family cell cycle protein | CPT03_RS13035 | Not Available | Negative | 3154542 - 3155708 | 42407.7 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | CPT03_RS13040 | Not Available | Negative | 3155712 - 3157055 | 49646.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CPT03_RS13045 | Not Available | Negative | 3157055 - 3158326 | 47207.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CPT03_RS13050 | Not Available | Negative | 3158326 - 3159783 | 52947.6 |
| penicillin-binding protein | CPT03_RS13055 | Not Available | Negative | 3159785 - 3161881 | 76670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

