Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS12960 | Not Available | Positive | 3138665 - 3139015 | 12631.2 |
| acyl transferase | CPT03_RS12965 | Not Available | Positive | 3139045 - 3140028 | 36891.0 |
| res family nad+ phosphorylase | CPT03_RS12970 | Not Available | Negative | 3140025 - 3140477 | 16836.4 |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | CPT03_RS12975 | Not Available | Negative | 3140477 - 3140956 | 17586.2 |
| tyrosine--trna ligase | CPT03_RS12980 | Not Available | Negative | 3141055 - 3142341 | 47891.2 |
| hypothetical protein | CPT03_RS12985 | Not Available | Positive | 3142446 - 3143132 | 26256.5 |
| nad-dependent dna ligase liga | CPT03_RS12990 | Not Available | Positive | 3143195 - 3145207 | 75938.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CPT03_RS12995 | Not Available | Positive | 3145218 - 3146099 | 31550.1 |
| hypothetical protein | CPT03_RS13000 | Not Available | Negative | 3146185 - 3146361 | 6525.87 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | CPT03_RS13005 | Not Available | Negative | 3146621 - 3147862 | 46238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

