Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS01270 | Not Available | Negative | 327364 - 328170 | 30616.4 |
| cytochrome ubiquinol oxidase subunit i | CPT03_RS01275 | Not Available | Positive | 328426 - 329754 | 48639.3 |
| cytochrome d ubiquinol oxidase subunit ii | CPT03_RS01280 | Not Available | Positive | 329759 - 330778 | 38010.5 |
| hypothetical protein | CPT03_RS01285 | Not Available | Positive | 330943 - 331809 | 30982.1 |
| outer membrane beta-barrel protein | CPT03_RS01290 | Not Available | Positive | 331859 - 334639 | 103063.0 |
| triple tyrosine motif-containing protein | CPT03_RS01295 | Not Available | Positive | 334705 - 337614 | 111847.0 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS01300 | Not Available | Positive | 337837 - 340968 | 113847.0 |
| hypothetical protein | CPT03_RS22920 | Not Available | Positive | 340980 - 341258 | 10335.3 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS01305 | Not Available | Positive | 341255 - 342514 | 46343.2 |
| glycoside hydrolase family 30 protein | CPT03_RS01310 | Not Available | Positive | 342575 - 343978 | 52115.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

