Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pr6pr family membrane protein | CPT03_RS12860 | Not Available | Negative | 3107306 - 3107944 | 24426.5 |
| alpha-l-fucosidase | CPT03_RS12865 | Not Available | Positive | 3108089 - 3109876 | 66522.0 |
| lytr/algr family response regulator transcription factor | CPT03_RS12870 | Not Available | Negative | 3109894 - 3110640 | 28373.2 |
| histidine kinase | CPT03_RS12875 | Not Available | Negative | 3110767 - 3113763 | 114897.0 |
| c-type cytochrome domain-containing protein | CPT03_RS12880 | Not Available | Negative | 3113806 - 3115215 | 50759.2 |
| sugar phosphate isomerase/epimerase family protein | CPT03_RS12885 | Not Available | Negative | 3115219 - 3116157 | 35398.4 |
| duf1501 domain-containing protein | CPT03_RS12890 | Not Available | Negative | 3116193 - 3117701 | 55285.0 |
| duf1553 domain-containing protein | CPT03_RS12895 | Not Available | Negative | 3117707 - 3120370 | 100850.0 |
| heavy metal translocating p-type atpase | CPT03_RS12900 | Not Available | Negative | 3120659 - 3122650 | 71331.8 |
| fur family transcriptional regulator | CPT03_RS12905 | Not Available | Negative | 3122697 - 3123128 | 16268.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

