Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS12750 | Not Available | Negative | 3087682 - 3087981 | 11382.6 |
| tetratricopeptide repeat protein | CPT03_RS12755 | Not Available | Positive | 3088165 - 3089310 | 43685.6 |
| riboflavin synthase | CPT03_RS12760 | Not Available | Negative | 3089311 - 3089895 | 21704.7 |
| acetyl-coa carboxylase biotin carboxylase subunit | CPT03_RS12765 | Not Available | Negative | 3089901 - 3091385 | 54572.7 |
| threonine aldolase family protein | CPT03_RS12770 | Not Available | Negative | 3091394 - 3092434 | 37444.4 |
| n-acetylglucosamine kinase | CPT03_RS12775 | Not Available | Positive | 3092866 - 3093723 | 32195.1 |
| nudix hydrolase | CPT03_RS12780 | Not Available | Negative | 3093794 - 3094483 | 26858.6 |
| 6-phosphofructokinase | CPT03_RS12785 | Not Available | Positive | 3094783 - 3095769 | 35153.3 |
| hypothetical protein | CPT03_RS12790 | Not Available | Positive | 3095772 - 3096614 | 31658.2 |
| type i glyceraldehyde-3-phosphate dehydrogenase | CPT03_RS12795 | Not Available | Positive | 3096619 - 3097617 | 35675.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

