Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS23105 | Not Available | Positive | 3053474 - 3053656 | 7042.3 |
| zinc dependent phospholipase c family protein | CPT03_RS23110 | Not Available | Positive | 3053619 - 3053978 | 13944.6 |
| deda family protein | CPT03_RS12610 | Not Available | Negative | 3054241 - 3054897 | 24682.0 |
| duf4397 domain-containing protein | CPT03_RS12615 | Not Available | Negative | 3054979 - 3055662 | 24253.9 |
| dna polymerase iii subunit beta | CPT03_RS12620 | Not Available | Negative | 3055751 - 3056875 | 41262.2 |
| gliding motility-associated abc transporter substrate-binding protein gldg | CPT03_RS12625 | Not Available | Negative | 3056910 - 3058592 | 62673.1 |
| gliding motility-associated abc transporter permease subunit gldf | CPT03_RS12630 | Not Available | Negative | 3058586 - 3059314 | 27111.9 |
| outer membrane beta-barrel protein | CPT03_RS12635 | Not Available | Negative | 3059319 - 3059840 | 18593.2 |
| outer membrane beta-barrel protein | CPT03_RS12640 | Not Available | Negative | 3060107 - 3060634 | 18301.9 |
| atp-binding cassette domain-containing protein | CPT03_RS12645 | Not Available | Negative | 3060754 - 3061461 | 26345.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

