Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | CPT03_RS12505 | Not Available | Negative | 3032301 - 3032711 | 15453.5 |
| peptide-methionine (s)-s-oxide reductase msra | CPT03_RS12510 | Not Available | Negative | 3032836 - 3033495 | 24955.8 |
| glu/leu/phe/val family dehydrogenase | CPT03_RS12515 | Not Available | Negative | 3033625 - 3035046 | 51758.1 |
| ccmd family protein | CPT03_RS12520 | Not Available | Negative | 3035196 - 3035414 | 8158.49 |
| cytochrome c biogenesis protein ccsa | CPT03_RS12525 | Not Available | Negative | 3035416 - 3036075 | 25146.1 |
| duf5007 domain-containing protein | CPT03_RS12530 | Not Available | Negative | 3036212 - 3037198 | 35938.5 |
| fasciclin domain-containing protein | CPT03_RS12535 | Not Available | Negative | 3037228 - 3037917 | 26067.2 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS12540 | Not Available | Negative | 3037946 - 3039406 | 55615.8 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS12545 | Not Available | Negative | 3039431 - 3042916 | 129226.0 |
| fecr family protein | CPT03_RS12550 | Not Available | Negative | 3043090 - 3044229 | 42654.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

