Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide exchange factor grpe | CPT03_RS12455 | Not Available | Positive | 3023975 - 3024574 | 22457.5 |
| molecular chaperone dnaj | CPT03_RS12460 | Not Available | Positive | 3024579 - 3025745 | 41520.3 |
| exopolyphosphatase | CPT03_RS12465 | Not Available | Positive | 3025824 - 3026732 | 33337.2 |
| maf family nucleotide pyrophosphatase | CPT03_RS12470 | Not Available | Negative | 3026729 - 3027298 | 21020.2 |
| periplasmic heavy metal sensor | CPT03_RS12475 | Not Available | Negative | 3027369 - 3027770 | 14709.6 |
| kdsc family phosphatase | CPT03_RS12480 | Not Available | Negative | 3027885 - 3028412 | 19088.2 |
| fe-s cluster assembly protein iscx | CPT03_RS12485 | Not Available | Negative | 3028419 - 3028661 | 9816.23 |
| 2fe-2s iron-sulfur cluster-binding protein | CPT03_RS12490 | Not Available | Negative | 3028690 - 3029022 | 12151.5 |
| rossmann-like and duf2520 domain-containing protein | CPT03_RS12495 | Not Available | Negative | 3029063 - 3029824 | 27839.7 |
| cytochrome c biogenesis protein ccsa | CPT03_RS12500 | Not Available | Negative | 3029824 - 3032295 | 92809.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

