Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | CPT03_RS12255 | Not Available | Negative | 2981412 - 2982551 | 42494.7 |
| rna polymerase sigma-70 factor | CPT03_RS12260 | Not Available | Negative | 2982663 - 2983232 | 22060.9 |
| Trna-leu | Not Available | Not Available | Positive | 2983768 - 2983847 | Not Available |
| duf3817 domain-containing protein | CPT03_RS12270 | Not Available | Negative | 2983893 - 2984192 | 11591.7 |
| fe-s protein assembly co-chaperone hscb | CPT03_RS12275 | Not Available | Negative | 2984281 - 2984811 | 20748.8 |
| rip metalloprotease rsep | CPT03_RS12280 | Not Available | Negative | 2984818 - 2986143 | 48714.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CPT03_RS12285 | Not Available | Negative | 2986183 - 2987334 | 42000.0 |
| gh3 auxin-responsive promoter family protein | CPT03_RS12290 | Not Available | Negative | 2987331 - 2988830 | 56180.4 |
| hypothetical protein | CPT03_RS12295 | Not Available | Negative | 2988840 - 2989628 | 30108.9 |
| glycosyltransferase | CPT03_RS12300 | Not Available | Negative | 2989625 - 2990593 | 37383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

