Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | CPT03_RS12050 | Not Available | Negative | 2924902 - 2926317 | 50654.5 |
| hypothetical protein | CPT03_RS12055 | Not Available | Negative | 2926329 - 2926961 | 23183.3 |
| hypothetical protein | CPT03_RS12060 | Not Available | Negative | 2927001 - 2928257 | 44314.2 |
| 7tm-dism domain-containing protein | CPT03_RS12065 | Not Available | Positive | 2928442 - 2929911 | 55415.8 |
| response regulator transcription factor | CPT03_RS12070 | Not Available | Positive | 2929908 - 2930552 | 23670.1 |
| 7tm diverse intracellular signaling domain-containing protein | CPT03_RS12075 | Not Available | Positive | 2930556 - 2932358 | 68732.1 |
| hemerythrin domain-containing protein | CPT03_RS12080 | Not Available | Positive | 2932494 - 2933174 | 26465.5 |
| ompa family protein | CPT03_RS12090 | Not Available | Positive | 2933394 - 2934641 | 45619.1 |
| gin domain-containing protein | CPT03_RS23095 | Not Available | Positive | 2934646 - 2935245 | 21832.4 |
| gin domain-containing protein | CPT03_RS23250 | Not Available | Positive | 2935173 - 2935355 | 6587.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

