Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose 1-dehydrogenase | CPT03_RS12005 | Not Available | Negative | 2918193 - 2918921 | 25736.3 |
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS12010 | Not Available | Negative | 2918934 - 2919947 | 36665.7 |
| duf932 domain-containing protein | CPT03_RS23240 | Not Available | Negative | 2920400 - 2920720 | 11851.9 |
| duf932 domain-containing protein | CPT03_RS23245 | Not Available | Negative | 2920743 - 2920928 | 7079.64 |
| duf6036 family nucleotidyltransferase | CPT03_RS12025 | Not Available | Negative | 2921412 - 2921882 | 17759.4 |
| hypothetical protein | CPT03_RS12030 | Not Available | Negative | 2921879 - 2922310 | 16947.8 |
| blai/meci/copy family transcriptional regulator | CPT03_RS22800 | Not Available | Positive | 2922807 - 2922998 | 6732.11 |
| fic family protein | CPT03_RS12035 | Not Available | Positive | 2922991 - 2923389 | 15453.7 |
| hypothetical protein | CPT03_RS12040 | Not Available | Positive | 2923918 - 2924222 | 12034.5 |
| hypothetical protein | CPT03_RS12045 | Not Available | Negative | 2924392 - 2924631 | 9313.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

