Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | CPT03_RS11905 | Not Available | Positive | 2889153 - 2890391 | 46941.3 |
| smr family transporter | CPT03_RS11910 | Not Available | Positive | 2890541 - 2890876 | 12088.4 |
| acyltransferase family protein | CPT03_RS11915 | Not Available | Positive | 2890997 - 2892082 | 41005.2 |
| pepsy-associated tm helix domain-containing protein | CPT03_RS11920 | Not Available | Positive | 2892253 - 2893413 | 44839.8 |
| arac family transcriptional regulator | CPT03_RS11925 | Not Available | Negative | 2893426 - 2894316 | 33848.9 |
| nad(p)/fad-dependent oxidoreductase | CPT03_RS11930 | Not Available | Negative | 2894439 - 2895677 | 45689.9 |
| 4-hydroxyproline epimerase | CPT03_RS11935 | Not Available | Negative | 2895702 - 2896703 | 36675.1 |
| aldehyde dehydrogenase (nadp(+)) | CPT03_RS11940 | Not Available | Negative | 2896696 - 2898276 | 56110.8 |
| dihydrodipicolinate synthase family protein | CPT03_RS11945 | Not Available | Negative | 2898273 - 2899208 | 34293.6 |
| alpha-n-acetylglucosaminidase | CPT03_RS11950 | Not Available | Negative | 2899349 - 2901637 | 87541.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

