Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose 5-phosphate isomerase a | CPT03_RS01170 | Not Available | Positive | 303154 - 303843 | 24601.1 |
| abc transporter permease | CPT03_RS01175 | Not Available | Negative | 303854 - 306394 | 93594.6 |
| abc transporter atp-binding protein | CPT03_RS01180 | Not Available | Negative | 306381 - 307076 | 25219.4 |
| arylesterase | CPT03_RS01185 | Not Available | Positive | 307160 - 307852 | 24900.5 |
| hypothetical protein | CPT03_RS01190 | Not Available | Positive | 307906 - 308388 | 18332.4 |
| dna polymerase iv | CPT03_RS01195 | Not Available | Positive | 308466 - 309623 | 43160.0 |
| dna polymerase iii subunit alpha | CPT03_RS01200 | Not Available | Positive | 309627 - 312578 | 112460.0 |
| mfs transporter | CPT03_RS01205 | Not Available | Negative | 312921 - 314219 | 48336.7 |
| hypothetical protein | CPT03_RS01210 | Not Available | Positive | 314336 - 314527 | 7199.55 |
| duf1684 domain-containing protein | CPT03_RS01215 | Not Available | Positive | 314611 - 315192 | 22384.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

