Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS23290 | Not Available | Negative | 2877287 - 2877561 | 10683.2 |
| efflux rnd transporter permease subunit | CPT03_RS11865 | Not Available | Negative | 2877606 - 2880629 | 111287.0 |
| efflux rnd transporter periplasmic adaptor subunit | CPT03_RS11870 | Not Available | Negative | 2880626 - 2881558 | 33686.7 |
| tolc family protein | CPT03_RS11875 | Not Available | Negative | 2881570 - 2882832 | 48130.0 |
| abc transporter atp-binding protein | CPT03_RS11880 | Not Available | Negative | 2882921 - 2884681 | 65324.4 |
| abc transporter atp-binding protein | CPT03_RS23075 | Not Available | Negative | 2884671 - 2885585 | 33517.4 |
| hypothetical protein | CPT03_RS23080 | Not Available | Negative | 2885589 - 2886421 | 30305.0 |
| duf1080 domain-containing protein | CPT03_RS11890 | Not Available | Negative | 2886472 - 2887182 | 26316.8 |
| gfo/idh/moca family protein | CPT03_RS11895 | Not Available | Negative | 2887202 - 2888509 | 48192.4 |
| ycii family protein | CPT03_RS11900 | Not Available | Positive | 2888715 - 2889056 | 12465.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

