Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | CPT03_RS23070 | Not Available | Positive | 2864327 - 2864521 | 7393.71 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS11820 | Not Available | Positive | 2864775 - 2867921 | 116219.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | CPT03_RS11825 | Not Available | Positive | 2867933 - 2869444 | 56833.1 |
| phosphonoacetate hydrolase | CPT03_RS11830 | Not Available | Positive | 2869571 - 2870812 | 45013.6 |
| phosphonoacetaldehyde dehydrogenase | CPT03_RS11835 | Not Available | Positive | 2870848 - 2872293 | 51975.1 |
| tigr03364 family fad-dependent oxidoreductase | CPT03_RS11840 | Not Available | Positive | 2872296 - 2873456 | 43204.6 |
| duf5690 family protein | CPT03_RS11845 | Not Available | Positive | 2873489 - 2874790 | 49399.6 |
| phosphatase pap2 family protein | CPT03_RS11850 | Not Available | Negative | 2874812 - 2875588 | 28287.1 |
| sensor histidine kinase | CPT03_RS11855 | Not Available | Negative | 2875635 - 2876888 | 47891.1 |
| winged helix-turn-helix domain-containing protein | CPT03_RS23380 | Not Available | Negative | 2876885 - 2877148 | 10144.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

