Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | CPT03_RS11725 | Not Available | Negative | 2842458 - 2843702 | 46704.1 |
| sigma-54-dependent transcriptional regulator | CPT03_RS11730 | Not Available | Positive | 2843885 - 2845258 | 51598.5 |
| sensor histidine kinase | CPT03_RS11735 | Not Available | Positive | 2845258 - 2846619 | 52204.5 |
| glucose-1-phosphate adenylyltransferase | CPT03_RS11740 | Not Available | Negative | 2846620 - 2847885 | 46541.0 |
| glycogen synthase | CPT03_RS11745 | Not Available | Negative | 2847898 - 2849304 | 53268.7 |
| sulfate adenylyltransferase subunit 1 | CPT03_RS11750 | Not Available | Negative | 2849786 - 2851036 | 46549.4 |
| sulfate adenylyltransferase subunit cysd | CPT03_RS11755 | Not Available | Negative | 2851036 - 2851941 | 34328.6 |
| phosphoadenylyl-sulfate reductase | CPT03_RS11760 | Not Available | Negative | 2851957 - 2852661 | 27369.5 |
| tsup family transporter | CPT03_RS11765 | Not Available | Negative | 2852664 - 2854148 | 53509.0 |
| uroporphyrinogen-iii c-methyltransferase | CPT03_RS11770 | Not Available | Negative | 2854190 - 2854981 | 28348.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

