Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sixa phosphatase family protein | CPT03_RS11625 | Not Available | Positive | 2809816 - 2810316 | 18680.0 |
| amp nucleosidase | CPT03_RS11630 | Not Available | Negative | 2810313 - 2811176 | 31690.5 |
| atp-dependent clp protease atp-binding subunit clpx | CPT03_RS11635 | Not Available | Negative | 2811315 - 2812556 | 46012.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | CPT03_RS11640 | Not Available | Negative | 2812559 - 2813254 | 25733.1 |
| trigger factor | CPT03_RS11645 | Not Available | Negative | 2813479 - 2814825 | 51209.8 |
| Trna-leu | Not Available | Not Available | Positive | 2814895 - 2814976 | Not Available |
| prolyl oligopeptidase family serine peptidase | CPT03_RS11655 | Not Available | Negative | 2815261 - 2817399 | 79129.9 |
| m1 family metallopeptidase | CPT03_RS11660 | Not Available | Positive | 2817531 - 2820008 | 92678.0 |
| ompa family protein | CPT03_RS11665 | Not Available | Positive | 2820057 - 2820581 | 19286.3 |
| abc transporter substrate-binding protein | CPT03_RS11670 | Not Available | Negative | 2820604 - 2821401 | 30760.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

