Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--serine o-phosphatidyltransferase | CPT03_RS11575 | Not Available | Positive | 2800836 - 2801522 | 25511.7 |
| histidine phosphotransferase | CPT03_RS11580 | Not Available | Negative | 2801519 - 2801896 | 14397.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CPT03_RS11585 | Not Available | Negative | 2801913 - 2802482 | 21923.9 |
| signal peptide peptidase sppa | CPT03_RS11590 | Not Available | Positive | 2802466 - 2804238 | 64770.9 |
| hypothetical protein | CPT03_RS11595 | Not Available | Negative | 2804250 - 2804861 | 22421.8 |
| dna polymerase/3'-5' exonuclease polx | CPT03_RS11600 | Not Available | Positive | 2805040 - 2806725 | 63100.9 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | CPT03_RS11605 | Not Available | Positive | 2806769 - 2807749 | 35124.2 |
| d-sedoheptulose 7-phosphate isomerase | CPT03_RS11610 | Not Available | Positive | 2807755 - 2808309 | 19709.8 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | CPT03_RS11615 | Not Available | Positive | 2808312 - 2808812 | 18011.7 |
| glycosyltransferase family 9 protein | CPT03_RS11620 | Not Available | Positive | 2808825 - 2809805 | 37061.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

