Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2791524 - 2791607 | Not Available |
| mbl fold metallo-hydrolase | CPT03_RS11530 | Not Available | Negative | 2791628 - 2792392 | 28844.7 |
| lola family protein | CPT03_RS11535 | Not Available | Negative | 2792452 - 2793102 | 24301.4 |
| ftsk/spoiiie family dna translocase | CPT03_RS11540 | Not Available | Negative | 2793112 - 2795670 | 95789.9 |
| ankyrin repeat domain-containing protein | CPT03_RS11545 | Not Available | Positive | 2796027 - 2796677 | 23418.2 |
| pspc domain-containing protein | CPT03_RS11550 | Not Available | Negative | 2796683 - 2796904 | 8772.07 |
| hypothetical protein | CPT03_RS11555 | Not Available | Negative | 2796906 - 2797121 | 8258.33 |
| dmt family transporter | CPT03_RS11560 | Not Available | Negative | 2797138 - 2798034 | 32826.2 |
| orotidine-5'-phosphate decarboxylase | CPT03_RS11565 | Not Available | Negative | 2798031 - 2798861 | 30879.1 |
| transcription termination factor rho | CPT03_RS11570 | Not Available | Positive | 2799135 - 2800832 | 62546.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

