Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | CPT03_RS11480 | Not Available | Negative | 2781839 - 2783083 | 45627.9 |
| crp/fnr family transcriptional regulator | CPT03_RS11485 | Not Available | Negative | 2783308 - 2783907 | 22982.7 |
| hypothetical protein | CPT03_RS11490 | Not Available | Positive | 2784119 - 2784742 | 24176.2 |
| hypothetical protein | CPT03_RS11495 | Not Available | Negative | 2785245 - 2785679 | 16904.4 |
| site-specific integrase | CPT03_RS11500 | Not Available | Negative | 2785744 - 2786769 | 39217.3 |
| tyrosine-type recombinase/integrase | CPT03_RS11505 | Not Available | Negative | 2786756 - 2787766 | 39081.7 |
| tyrosine-type recombinase/integrase | CPT03_RS11510 | Not Available | Negative | 2787759 - 2788991 | 46562.3 |
| hypothetical protein | CPT03_RS22795 | Not Available | Negative | 2789258 - 2789422 | 6507.02 |
| rhum family protein | CPT03_RS11515 | Not Available | Positive | 2789879 - 2790862 | 37381.8 |
| hypothetical protein | CPT03_RS11520 | Not Available | Positive | 2790930 - 2791388 | 17772.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

