Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glxa family transcriptional regulator | CPT03_RS11430 | Not Available | Positive | 2771701 - 2772678 | 37144.2 |
| sulfite exporter taue/safe family protein | CPT03_RS11435 | Not Available | Negative | 2772666 - 2773397 | 27175.3 |
| duf6496 domain-containing protein | CPT03_RS11440 | Not Available | Negative | 2773472 - 2773651 | 6480.06 |
| hypothetical protein | CPT03_RS11445 | Not Available | Positive | 2774013 - 2774213 | 7387.22 |
| sensor histidine kinase | CPT03_RS11450 | Not Available | Negative | 2774485 - 2775795 | 49251.8 |
| sigma-54-dependent transcriptional regulator | CPT03_RS11455 | Not Available | Negative | 2775779 - 2777155 | 51766.8 |
| abc transporter permease | CPT03_RS11460 | Not Available | Negative | 2777174 - 2778307 | 42360.3 |
| abc transporter permease | CPT03_RS11465 | Not Available | Negative | 2778325 - 2779575 | 46381.9 |
| abc transporter atp-binding protein | CPT03_RS11470 | Not Available | Negative | 2779595 - 2780263 | 24471.9 |
| tolc family protein | CPT03_RS11475 | Not Available | Negative | 2780363 - 2781814 | 54417.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

