Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | CPT03_RS01120 | Not Available | Negative | 294757 - 296040 | 48842.5 |
| sensor histidine kinase | CPT03_RS01125 | Not Available | Negative | 296115 - 297476 | 52101.1 |
| response regulator transcription factor | CPT03_RS01130 | Not Available | Negative | 297473 - 298153 | 25826.5 |
| orf6n domain-containing protein | CPT03_RS01135 | Not Available | Positive | 298487 - 299029 | 21040.8 |
| ktsc domain-containing protein | CPT03_RS01140 | Not Available | Positive | 299086 - 299532 | 16928.3 |
| hypothetical protein | CPT03_RS01145 | Not Available | Positive | 299642 - 300067 | 15928.0 |
| duf3267 domain-containing protein | CPT03_RS01150 | Not Available | Positive | 300100 - 300687 | 22155.3 |
| hypothetical protein | CPT03_RS01155 | Not Available | Positive | 300737 - 301219 | 17330.9 |
| duf1080 domain-containing protein | CPT03_RS01160 | Not Available | Negative | 301285 - 302001 | 26509.6 |
| hypothetical protein | CPT03_RS01165 | Not Available | Positive | 302172 - 303083 | 34702.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

