Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | CPT03_RS11380 | Not Available | Negative | 2762762 - 2764060 | 48465.8 |
| heavy-metal-associated domain-containing protein | CPT03_RS11385 | Not Available | Negative | 2764085 - 2764429 | 12460.1 |
| hyc_cc_pp family protein | CPT03_RS11390 | Not Available | Negative | 2764531 - 2764929 | 14848.2 |
| dtdp-4-dehydrorhamnose reductase | CPT03_RS11395 | Not Available | Negative | 2765015 - 2765881 | 31792.2 |
| sugar-binding domain-containing protein | CPT03_RS11400 | Not Available | Negative | 2765969 - 2769082 | 118107.0 |
| dihydrofolate reductase family protein | CPT03_RS11405 | Not Available | Negative | 2769260 - 2769799 | 20059.2 |
| glyoxalase | CPT03_RS11410 | Not Available | Negative | 2769852 - 2770253 | 15269.3 |
| srpbcc family protein | CPT03_RS11415 | Not Available | Negative | 2770265 - 2770714 | 16786.3 |
| doxx family protein | CPT03_RS11420 | Not Available | Negative | 2770741 - 2771118 | 13958.5 |
| srpbcc family protein | CPT03_RS11425 | Not Available | Negative | 2771143 - 2771565 | 15843.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

