Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-transporting atpase subunit c | CPT03_RS11280 | Not Available | Negative | 2739154 - 2739723 | 20389.1 |
| potassium-transporting atpase subunit kdpb | CPT03_RS11285 | Not Available | Negative | 2739796 - 2741829 | 72298.3 |
| potassium-transporting atpase subunit kdpa | CPT03_RS11290 | Not Available | Negative | 2741832 - 2743550 | 62092.7 |
| k(+)-transporting atpase subunit f | CPT03_RS23375 | Not Available | Negative | 2743560 - 2743637 | 2989.04 |
| sigma-54-dependent transcriptional regulator | CPT03_RS11300 | Not Available | Negative | 2743901 - 2745250 | 50500.6 |
| hypothetical protein | CPT03_RS22965 | Not Available | Negative | 2745271 - 2746230 | 35595.5 |
| Trna-cys | Not Available | Not Available | Positive | 2746482 - 2746555 | Not Available |
| voc family protein | CPT03_RS11315 | Not Available | Negative | 2746800 - 2747186 | 14724.7 |
| wd40/yvtn/bnr-like repeat-containing protein | CPT03_RS11320 | Not Available | Negative | 2747198 - 2748220 | 36641.7 |
| duf2147 domain-containing protein | CPT03_RS11325 | Not Available | Negative | 2748220 - 2748651 | 16138.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

