Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-binding glutamate synthase family protein | CPT03_RS11130 | Not Available | Negative | 2707659 - 2709323 | 60784.4 |
| l-threonylcarbamoyladenylate synthase | CPT03_RS11135 | Not Available | Positive | 2709400 - 2710020 | 22962.6 |
| na+/h+ antiporter nhaa | CPT03_RS11140 | Not Available | Positive | 2710021 - 2711202 | 42352.3 |
| tryptophan synthase subunit alpha | CPT03_RS11145 | Not Available | Negative | 2711192 - 2711959 | 28142.9 |
| tryptophan synthase subunit beta | CPT03_RS11150 | Not Available | Negative | 2711964 - 2713145 | 43083.7 |
| phosphoribosylanthranilate isomerase | CPT03_RS11155 | Not Available | Negative | 2713179 - 2713808 | 24022.6 |
| anthranilate phosphoribosyltransferase | CPT03_RS11160 | Not Available | Negative | 2713808 - 2714797 | 36160.1 |
| sdr family oxidoreductase | CPT03_RS11165 | Not Available | Negative | 2715048 - 2715863 | 29422.1 |
| recombination mediator recr | CPT03_RS11170 | Not Available | Negative | 2715869 - 2716486 | 22898.8 |
| sodium:solute symporter | CPT03_RS11175 | Not Available | Positive | 2716569 - 2718047 | 54981.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

