Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS11080 | Not Available | Negative | 2697597 - 2697926 | 12296.8 |
| abc transporter atp-binding protein | CPT03_RS11085 | Not Available | Negative | 2697930 - 2698580 | 23403.4 |
| hypothetical protein | CPT03_RS11090 | Not Available | Positive | 2698701 - 2699330 | 23144.8 |
| winged helix-turn-helix domain-containing protein | CPT03_RS11095 | Not Available | Positive | 2699330 - 2699626 | 11066.7 |
| duf4173 domain-containing protein | CPT03_RS11105 | Not Available | Positive | 2699999 - 2701618 | 62338.9 |
| hypothetical protein | CPT03_RS11110 | Not Available | Positive | 2701635 - 2702390 | 29656.7 |
| adp-forming succinate--coa ligase subunit beta | CPT03_RS11115 | Not Available | Positive | 2702432 - 2703622 | 42756.5 |
| hypothetical protein | CPT03_RS22955 | Not Available | Negative | 2703733 - 2704008 | 11042.6 |
| group ii intron reverse transcriptase/maturase | CPT03_RS11120 | Not Available | Negative | 2704016 - 2705008 | 37777.9 |
| asparagine--trna ligase | CPT03_RS11125 | Not Available | Positive | 2706145 - 2707593 | 55458.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

