Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase regulatory-like domain-containing protein | CPT03_RS11030 | Not Available | Negative | 2686121 - 2689264 | 115147.0 |
| dihydrolipoyl dehydrogenase | CPT03_RS11035 | Not Available | Positive | 2689589 - 2690977 | 48811.1 |
| mbl fold metallo-hydrolase | CPT03_RS11040 | Not Available | Positive | 2691205 - 2692053 | 32172.4 |
| yegp family protein | CPT03_RS11045 | Not Available | Positive | 2692145 - 2692474 | 11896.7 |
| helix-turn-helix domain-containing protein | CPT03_RS11050 | Not Available | Negative | 2692584 - 2692787 | 7392.28 |
| rna polymerase sigma factor rpod/siga | CPT03_RS11055 | Not Available | Positive | 2693116 - 2693976 | 32680.1 |
| hypothetical protein | CPT03_RS11060 | Not Available | Negative | 2694043 - 2694309 | 9957.83 |
| m28 family peptidase | CPT03_RS11065 | Not Available | Positive | 2694433 - 2695365 | 34630.2 |
| s41 family peptidase | CPT03_RS11070 | Not Available | Negative | 2695373 - 2696935 | 56709.7 |
| had hydrolase-like protein | CPT03_RS11075 | Not Available | Negative | 2696983 - 2697597 | 23863.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

