Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | CPT03_RS10925 | Not Available | Negative | 2663809 - 2664354 | 21209.8 |
| acyl-coa thioesterase | CPT03_RS10930 | Not Available | Negative | 2664427 - 2664996 | 21267.7 |
| energy transducer tonb | CPT03_RS10935 | Not Available | Negative | 2665105 - 2665959 | 31350.6 |
| glutamine synthetase iii | CPT03_RS10945 | Not Available | Positive | 2666408 - 2668594 | 81430.5 |
| air synthase related protein | CPT03_RS10950 | Not Available | Positive | 2668735 - 2669916 | 42904.1 |
| sgnh/gdsl hydrolase family protein | CPT03_RS10955 | Not Available | Negative | 2670006 - 2670701 | 25864.5 |
| l-fucose:h+ symporter permease | CPT03_RS10960 | Not Available | Negative | 2670728 - 2671972 | 44805.8 |
| gh92 family glycosyl hydrolase | CPT03_RS10965 | Not Available | Negative | 2672021 - 2674288 | 86101.9 |
| s46 family peptidase | CPT03_RS10970 | Not Available | Negative | 2674624 - 2676786 | 81013.2 |
| phzf family phenazine biosynthesis protein | CPT03_RS10975 | Not Available | Negative | 2676834 - 2677625 | 29424.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

