Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | CPT03_RS10875 | Not Available | Negative | 2644218 - 2647391 | 116453.0 |
| sialate o-acetylesterase | CPT03_RS10880 | Not Available | Negative | 2647711 - 2649708 | 72711.6 |
| class 1 fructose-bisphosphatase | CPT03_RS10885 | Not Available | Negative | 2649822 - 2650907 | 39470.4 |
| metallophosphoesterase family protein | CPT03_RS10890 | Not Available | Negative | 2650929 - 2651420 | 18338.1 |
| trna1(val) (adenine(37)-n6)-methyltransferase | CPT03_RS10895 | Not Available | Negative | 2651475 - 2652179 | 26069.4 |
| phosphoribosylformylglycinamidine synthase | CPT03_RS10900 | Not Available | Positive | 2652258 - 2655923 | 134228.0 |
| gfo/idh/moca family oxidoreductase | CPT03_RS10905 | Not Available | Positive | 2656111 - 2657478 | 50732.2 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS10910 | Not Available | Negative | 2657563 - 2659044 | 55575.8 |
| tonb-dependent receptor | CPT03_RS10915 | Not Available | Negative | 2659056 - 2662334 | 120833.0 |
| fecr family protein | CPT03_RS10920 | Not Available | Negative | 2662528 - 2663730 | 44007.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

