Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh92 family glycosyl hydrolase | CPT03_RS10825 | Not Available | Negative | 2626491 - 2628848 | 87521.1 |
| sugar porter family mfs transporter | CPT03_RS10830 | Not Available | Negative | 2628832 - 2630214 | 50274.9 |
| class i mannose-6-phosphate isomerase | CPT03_RS10835 | Not Available | Negative | 2630260 - 2632050 | 69074.1 |
| gntr family transcriptional regulator | CPT03_RS10840 | Not Available | Positive | 2632335 - 2633069 | 28138.9 |
| gh92 family glycosyl hydrolase | CPT03_RS10845 | Not Available | Negative | 2633066 - 2635333 | 85397.0 |
| gh92 family glycosyl hydrolase | CPT03_RS10850 | Not Available | Negative | 2635341 - 2638484 | 118699.0 |
| hypothetical protein | CPT03_RS10855 | Not Available | Negative | 2638487 - 2639791 | 49119.4 |
| duf4998 domain-containing protein | CPT03_RS10860 | Not Available | Negative | 2639842 - 2641047 | 44809.6 |
| duf5000 domain-containing lipoprotein | CPT03_RS10865 | Not Available | Negative | 2641086 - 2642255 | 43207.4 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS10870 | Not Available | Negative | 2642294 - 2644201 | 72587.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

