Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS10775 | Not Available | Positive | 2616957 - 2618183 | 47174.8 |
| hypothetical protein | CPT03_RS10780 | Not Available | Positive | 2618217 - 2618825 | 21851.8 |
| set domain-containing protein-lysine n-methyltransferase | CPT03_RS10785 | Not Available | Positive | 2618825 - 2619235 | 15726.5 |
| set domain-containing protein | CPT03_RS10790 | Not Available | Positive | 2619235 - 2619642 | 15522.7 |
| hypothetical protein | CPT03_RS10795 | Not Available | Positive | 2619716 - 2620042 | 11687.2 |
| family 43 glycosylhydrolase | CPT03_RS10800 | Not Available | Negative | 2620076 - 2621146 | 40646.8 |
| abc transporter permease | CPT03_RS10805 | Not Available | Positive | 2621313 - 2623715 | 90153.1 |
| hypothetical protein | CPT03_RS10810 | Not Available | Positive | 2623779 - 2624327 | 20732.7 |
| metallophosphoesterase family protein | CPT03_RS10815 | Not Available | Negative | 2624355 - 2625323 | 36945.8 |
| metallophosphoesterase family protein | CPT03_RS10820 | Not Available | Positive | 2625646 - 2626488 | 31789.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

