Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | CPT03_RS10725 | Not Available | Negative | 2601599 - 2602246 | 24216.6 |
| tetratricopeptide repeat protein | CPT03_RS10730 | Not Available | Negative | 2602243 - 2604354 | 79613.5 |
| ipt/tig domain-containing protein | CPT03_RS10735 | Not Available | Negative | 2604606 - 2606228 | 56973.8 |
| response regulator | CPT03_RS10740 | Not Available | Negative | 2606343 - 2606957 | 22789.2 |
| sensor histidine kinase | CPT03_RS10745 | Not Available | Negative | 2606967 - 2608907 | 73110.3 |
| hypothetical protein | CPT03_RS10750 | Not Available | Positive | 2609077 - 2609682 | 23005.2 |
| tetratricopeptide repeat protein | CPT03_RS10755 | Not Available | Positive | 2609752 - 2611881 | 78439.3 |
| lipocalin family protein | CPT03_RS10760 | Not Available | Positive | 2611985 - 2613583 | 58794.6 |
| hypothetical protein | CPT03_RS10765 | Not Available | Positive | 2613591 - 2614883 | 48907.9 |
| tetratricopeptide repeat protein | CPT03_RS10770 | Not Available | Positive | 2614895 - 2616943 | 75291.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

