Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acr3 family arsenite efflux transporter | CPT03_RS10675 | Not Available | Negative | 2593004 - 2594065 | 38899.1 |
| low molecular weight phosphatase family protein | CPT03_RS10680 | Not Available | Negative | 2594072 - 2594698 | 23496.7 |
| duf6428 family protein | CPT03_RS10685 | Not Available | Negative | 2594717 - 2595184 | 16928.2 |
| arsr/smtb family transcription factor | CPT03_RS10690 | Not Available | Negative | 2595240 - 2595569 | 11767.4 |
| tonb-dependent receptor | CPT03_RS10695 | Not Available | Negative | 2595716 - 2597896 | 80267.0 |
| hypothetical protein | CPT03_RS10700 | Not Available | Negative | 2597958 - 2598278 | 11681.4 |
| hypothetical protein | CPT03_RS10705 | Not Available | Negative | 2598547 - 2598984 | 17234.8 |
| alpha/beta hydrolase family protein | CPT03_RS10710 | Not Available | Negative | 2599245 - 2599601 | 12754.4 |
| hypothetical protein | CPT03_RS10715 | Not Available | Negative | 2600128 - 2600619 | 17907.3 |
| helix-turn-helix domain-containing protein | CPT03_RS10720 | Not Available | Negative | 2600705 - 2601559 | 32794.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

