Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS10420 | Not Available | Negative | 2529701 - 2531026 | 48766.1 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS10425 | Not Available | Negative | 2531037 - 2534192 | 115245.0 |
| glycoside hydrolase family 43 protein | CPT03_RS10430 | Not Available | Positive | 2534594 - 2535571 | 36755.7 |
| winged helix-turn-helix transcriptional regulator | CPT03_RS10435 | Not Available | Negative | 2535558 - 2535914 | 13592.6 |
| sdr family nad(p)-dependent oxidoreductase | CPT03_RS10440 | Not Available | Positive | 2536026 - 2536766 | 25952.2 |
| type i methionyl aminopeptidase | CPT03_RS10445 | Not Available | Negative | 2536822 - 2537586 | 27746.1 |
| hypothetical protein | CPT03_RS10450 | Not Available | Positive | 2537798 - 2538109 | 11226.5 |
| hypothetical protein | CPT03_RS10455 | Not Available | Positive | 2538222 - 2538929 | 27019.2 |
| imp dehydrogenase | CPT03_RS10460 | Not Available | Negative | 2539080 - 2540549 | 52241.3 |
| beta-n-acetylhexosaminidase | CPT03_RS10465 | Not Available | Negative | 2540714 - 2542330 | 61183.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

