Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | CPT03_RS01015 | Not Available | Positive | 269413 - 269883 | 17545.5 |
| alpha/beta hydrolase | CPT03_RS01020 | Not Available | Positive | 269899 - 270984 | 39712.5 |
| carboxymuconolactone decarboxylase family protein | CPT03_RS01025 | Not Available | Positive | 271060 - 271803 | 27020.2 |
| alpha/beta hydrolase | CPT03_RS01030 | Not Available | Positive | 271813 - 272877 | 38833.2 |
| cupin domain-containing protein | CPT03_RS01035 | Not Available | Positive | 272889 - 273374 | 17717.1 |
| Trna-arg | Not Available | Not Available | Positive | 273397 - 273468 | Not Available |
| laci family dna-binding transcriptional regulator | CPT03_RS01045 | Not Available | Negative | 273523 - 274575 | 38995.8 |
| sialate o-acetylesterase | CPT03_RS01055 | Not Available | Positive | 275375 - 276784 | 51750.5 |
| endonuclease/exonuclease/phosphatase family protein | CPT03_RS01060 | Not Available | Negative | 276838 - 277638 | 29266.7 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS01065 | Not Available | Negative | 277663 - 279402 | 65970.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

