Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 43 glycosylhydrolase | CPT03_RS10370 | Not Available | Negative | 2511125 - 2513191 | 76385.3 |
| family 43 glycosylhydrolase | CPT03_RS10375 | Not Available | Negative | 2513188 - 2514252 | 39455.3 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS10380 | Not Available | Negative | 2514263 - 2515792 | 58794.8 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS10385 | Not Available | Negative | 2515804 - 2518824 | 110288.0 |
| hybrid sensor histidine kinase/response regulator transcription factor | CPT03_RS10390 | Not Available | Positive | 2519031 - 2523020 | 151296.0 |
| yeih family protein | CPT03_RS10395 | Not Available | Negative | 2523087 - 2524343 | 45404.6 |
| phytoene desaturase family protein | CPT03_RS10400 | Not Available | Negative | 2524383 - 2525816 | 51392.9 |
| tigr01777 family oxidoreductase | CPT03_RS10405 | Not Available | Negative | 2525823 - 2526755 | 34218.7 |
| doxx family protein | CPT03_RS10410 | Not Available | Negative | 2526768 - 2528288 | 58234.3 |
| hypothetical protein | CPT03_RS10415 | Not Available | Negative | 2528311 - 2529672 | 53250.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

